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Dataset Guide

Published on 30th November, 2022.

Introduction

Dataset is referring to data stored under /datasets on CREATE HPC.

The purpose of dataset is to share commonly used data among users.

The benefit of using a dataset includes:

  • prevent duplication
  • restrict user access to execute and read only. (write access can be provided to principal investigator, administrator and maintainer)

Datasets that are available on CREATE HPC

These are the following datasets that are available for request within CREATE:

These are the datasets publicly available to all users within CREATE:

If you need to obtain access to any of the dataset listed above, please apply for access on the e-research portal groups page or, if there is not an "Apply" button visible for the group, email one of the named contacts to request access.

answerals

Role Email Name
Principal Investigator alfredo.iacoangeli@kcl.ac.uk Alfredo Iacoangli

bioresource

Role Email Name
Principal Investigator gerome.breen@kcl.ac.uk Gerome Breen
Administrator jonathan.coleman@kcl.ac.uk Jonathan Coleman
Administrator sang_hyuck.lee@kcl.ac.uk Sang-Hyuck Lee
Administrator rujia.1.wang@kcl.ac.uk Rujia Wang

bstop

Role Email Name
Principal Investigator michael.simpson@kcl.ac.uk Michael Simpson
Administrator nick.dand@kcl.ac.uk Nick Dand

commonmind

Role Email Name
Principal Investigator TBA

gtex_v8

Role Email Name
Principal Investigator alan.hodgkinson@kcl.ac.uk Alan Hodgkinson
Administrator oliver.pain@kcl.ac.uk Oliver Pain

image_net

Role Email Name
Principal Investigator TBA

tcga

Role Email Name
Principal Investigator francesca.ciccarelli@kcl.ac.uk Francesca Ciccarelli

trem2

Role Email Name
Principal Investigator alfredo.iacoangeli@kcl.ac.uk Alfredo Iacoangli
Principal Investigator angela.k.hodges@kcl.ac.uk Angela Hodges
Principal Investigator richard.j.dobson@kcl.ac.uk Richard Dobson

ukbiobank

Role Email Name
Principal Investigator gerome.breen@kcl.ac.uk Gerome Breen
Administrator jonathan.coleman@kcl.ac.uk Jonathan Coleman
Administrator alexandra.a.gillett@kcl.ac.uk Alexandra Gillett